BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004G10SP1|AL425287
(571 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1193 544 e-155
>3x_Contig1193
Length = 4968
Score = 544 bits (265), Expect = e-155
Identities = 344/383 (89%), Gaps = 4/383 (1%)
Strand = Plus / Minus
Query: 88 tgcaaaaagatgagacaacgaaaacagtgacgtagcaaccaacagasggaataaaacckt 147
||||||||||| |||||||||||||| | ||||||||||||||||| | ||||||||| |
Sbjct: 379 tgcaaaaagat-agacaacgaaaacatt-acgtagcaaccaacagacgtaataaaacctt 322
Query: 148 taasagattctsgaattatrtsgtgtaakcgatacatatcagaacacscgcgcatkracg 207
||| ||||||| ||||||| | |||||| |||||||||||||||||| ||||||| |||
Sbjct: 321 taacagattctcgaattatatcgtgtaatcgatacatatcagaacacccgcgcattaacg 262
Query: 208 katkgaaatgggragktttcttgttccatacttttgtggtcgcagctaggacgatgrtgt 267
|| ||||||| || ||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 261 tattgaaatggtaagttttcttgttccatacttttttggtcgcagctaggacgattatgt 202
Query: 268 gcsatctgcgatcgatgaagccrcagaktttgkcacsttactaacsratkgraacgkggc 327
| |||||||||||||||| || |||| |||| ||| |||||||| || |||| ||
Sbjct: 201 -ccatctgcgatcgatgaatccacagattttgtcaccttactaaccaatttaaacgttgc 143
Query: 328 aggrtccagaggaattcgaaaccaattaaccctaaaccctttttacatcaattgatagac 387
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 aggatccagaggaattc-aaaccaattaaccctaaaccctttttacatcaattgatagac 84
Query: 388 aaagatgtgctggtgacactcaaattcaataaaatacaatataaaggaagacttgtatcg 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 aaagatgtgctggtgacactcaaattcaataaaatacaatataaaggaagacttgtatcg 24
Query: 448 gtagatacatatttcartctaca 470
|||||||||||||||| ||||||
Sbjct: 23 gtagatacatatttcaatctaca 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.718 1.35
Gapped
Lambda K H
1.42 0.718 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2979
Number of Sequences: 1807
Number of extensions: 2979
Number of successful extensions: 83
Number of sequences better than 1.0e-20: 1
length of query: 571
length of database: 10,358,551
effective HSP length: 16
effective length of query: 555
effective length of database: 10,329,639
effective search space: 5732949645
effective search space used: 5732949645
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.8 bits)
S1: 11 (23.1 bits)
S2: 48 (99.1 bits)